A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1025452



Internal ID18767984
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:7409831..7941317hg38UCSC Ensembl
Innerchr8:7267353..7798839hg19UCSC Ensembl
Innerchr8:7254763..7836249hg18UCSC Ensembl
Cytoband8p23.1
Allele length
AssemblyAllele length
hg38531487
hg19531487
hg18581487
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv6936n100
Supporting Variantsnssv3679985, nssv3679948, nssv3679973, nssv3679942, nssv3756435, nssv3679922, nssv3679943, nssv3679975, nssv3679967, nssv3679936, nssv3679968, nssv3679937, nssv3679980, nssv3679956, nssv3679950, nssv3679966, nssv3679960, nssv3679935, nssv3679938, nssv3679962, nssv3679963, nssv3679958, nssv3679983, nssv3756432, nssv3679957, nssv3679955, nssv3679934, nssv3679961, nssv3679944, nssv3679933, nssv3679970, nssv3679969, nssv3679959, nssv3679952, nssv3679949, nssv3679965, nssv3679927, nssv3679974, nssv3679979, nssv3679946, nssv3679976, nssv3679932, nssv3756436, nssv3679947, nssv3679978, nssv3679930, nssv3679929, nssv3679925, nssv3679921, nssv3679972, nssv3679971, nssv3679940, nssv3679924, nssv3756434, nssv3679951, nssv3679939, nssv3679954, nssv3679945, nssv3756433, nssv3679984, nssv3679941, nssv3679923, nssv3679928, nssv3679926, nssv3679981, nssv3679953, nssv3679964, nssv3679977, nssv3679982, nssv3679931
Samples
Known GenesDEFB103A, DEFB103B, DEFB104A, DEFB104B, DEFB105A, DEFB105B, DEFB106A, DEFB106B, DEFB107A, DEFB107B, DEFB4A, DEFB4B, FAM90A10P, FAM90A7P, PRR23D1, PRR23D2, SPAG11A, SPAG11B, ZNF705B
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1025452
Frequency
Sample Size29084
Observed Gain40
Observed Loss30
Observed Complex0
Frequencyn/a


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