A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1024212



Internal ID18766745
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:69571455..71358233hg38UCSC Ensembl
Innerchr5:68867282..70654060hg19UCSC Ensembl
Innerchr5:68903038..70689816hg18UCSC Ensembl
Cytoband5q13.2
Allele length
AssemblyAllele length
hg381786779
hg191786779
hg181786779
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv5696n100
Supporting Variantsnssv3747288, nssv3747287, nssv3640983, nssv3747289
Samples
Known GenesGTF2H2, GTF2H2B, GTF2H2C, GTF2H2D, GUSBP3, GUSBP9, LOC100272216, LOC441081, LOC647859, NAIP, SERF1A, SERF1B, SMA4, SMA5, SMN1, SMN2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1024212
Frequency
Sample Size29084
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


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