A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10236



Internal ID15498513
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:132029..141096hg38UCSC Ensembl
Outerchr3:173712..182779hg19UCSC Ensembl
Outerchr3:148712..157779hg18UCSC Ensembl
Outerchr3:148712..157779hg17UCSC Ensembl
Cytoband3p26.3
Allele length
AssemblyAllele length
hg389068
hg199068
hg189068
hg179068
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv11811, nssv11817, nssv29188, nssv29106, nssv11918, nssv29031, nssv28755, nssv12533, nssv28754, nssv12563, nssv29205, nssv28141, nssv28904
SamplesNA18980, NA12155, NA18563, NA18860, NA18975, NA19007, NA12872, NA19132, NA18564, NA19240, NA12740, NA18972
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10236
Frequency
Sample Size31
Observed Gain2
Observed Loss11
Observed Complex0
Frequencyn/a


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