A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1023453



Internal ID18765986
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:25853602..26528022hg38UCSC Ensembl
Innerchr6:25853830..26528250hg19UCSC Ensembl
Innerchr6:25961809..26636229hg18UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg38674421
hg19674421
hg18674421
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3654841
Samples
Known GenesBTN1A1, BTN2A1, BTN2A2, BTN2A3P, BTN3A1, BTN3A2, BTN3A3, HCG11, HFE, HIST1H1A, HIST1H1C, HIST1H1D, HIST1H1E, HIST1H1T, HIST1H2AB, HIST1H2AC, HIST1H2AD, HIST1H2AE, HIST1H2BB, HIST1H2BC, HIST1H2BD, HIST1H2BE, HIST1H2BF, HIST1H2BG, HIST1H2BH, HIST1H2BI, HIST1H3A, HIST1H3B, HIST1H3C, HIST1H3D, HIST1H3E, HIST1H3F, HIST1H3G, HIST1H4A, HIST1H4B, HIST1H4C, HIST1H4D, HIST1H4E, HIST1H4F, HIST1H4G, HIST1H4H, LOC285819, SLC17A2, SLC17A3, TRIM38
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1023453
Frequency
Sample Size29084
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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