A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1021358



Internal ID19110575
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32485140..32562509hg38UCSC Ensembl
Innerchr6:32452917..32530286hg19UCSC Ensembl
Innerchr6:32560895..32638264hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3877370
hg1977370
hg1877370
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv5949n100
Supporting Variantsnssv3657226, nssv3657249, nssv3657232, nssv3657228, nssv3657240, nssv3657233, nssv3657252, nssv3657227, nssv3657251, nssv3657245, nssv3657229, nssv3657237, nssv3657231, nssv3745445, nssv3657250, nssv3657248, nssv3745441, nssv3745440, nssv3657243, nssv3745439, nssv3657247, nssv3657225, nssv3745443, nssv3657235, nssv3657234, nssv3745444, nssv3657241, nssv3657246, nssv3657230, nssv3657238, nssv3657239, nssv3657253, nssv3657254, nssv3657236, nssv3657242, nssv3657244, nssv3745442
Samples
Known GenesHLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1021358
Frequency
Sample Size11257
Observed Gain32
Observed Loss5
Observed Complex0
Frequencyn/a


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