A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv1020889

Internal ID

19110107

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr7:143130861..143194616	hg38	UCSC Ensembl
Inner	chr7:142827954..142891709	hg19	UCSC Ensembl
Inner	chr7:142538076..142601831	hg18	UCSC Ensembl

Cytoband

7q34

Allele length

Assembly	Allele length
hg38	63756
hg19	63756
hg18	63756

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv3669552, nssv3669549, nssv3669520, nssv3759969, nssv3669570, nssv3669546, nssv3669606, nssv3669536, nssv3669574, nssv3669532, nssv3669623, nssv3669519, nssv3669588, nssv3759961, nssv3759942, nssv3669533, nssv3759914, nssv3669573, nssv3669534, nssv3759920, nssv3759955, nssv3669560, nssv3669564, nssv3669609, nssv3669551, nssv3669562, nssv3759927, nssv3669540, nssv3669572, nssv3669605, nssv3759921, nssv3669581, nssv3669522, nssv3669621, nssv3669567, nssv3669515, nssv3759965, nssv3669566, nssv3759944, nssv3759932, nssv3669594, nssv3669523, nssv3669521, nssv3669541, nssv3759956, nssv3759947, nssv3759968, nssv3759934, nssv3669627, nssv3669598, nssv3759954, nssv3759919, nssv3759962, nssv3759963, nssv3669556, nssv3669580, nssv3669539, nssv3669590, nssv3759924, nssv3669576, nssv3669625, nssv3759931, nssv3759922, nssv3669628, nssv3669524, nssv3759945, nssv3669578, nssv3759957, nssv3669526, nssv3759916, nssv3759951, nssv3759964, nssv3759959, nssv3759953, nssv3759948, nssv3669611, nssv3669591, nssv3669617, nssv3669616, nssv3669584, nssv3759935, nssv3759930, nssv3759941, nssv3669610, nssv3669558, nssv3669597, nssv3669577, nssv3669559, nssv3669543, nssv3759970, nssv3669601, nssv3669557, nssv3669575, nssv3669518, nssv3759971, nssv3669582, nssv3669529, nssv3669586, nssv3669563, nssv3669545, nssv3759926, nssv3669596, nssv3669517, nssv3669513, nssv3669607, nssv3669527, nssv3669555, nssv3669553, nssv3669608, nssv3759939, nssv3669630, nssv3669613, nssv3669585, nssv3669544, nssv3669525, nssv3669550, nssv3669528, nssv3759966, nssv3669530, nssv3669615, nssv3669603, nssv3759918, nssv3759938, nssv3669571, nssv3759915, nssv3759923, nssv3669600, nssv3669587, nssv3669579, nssv3669569, nssv3669604, nssv3669537, nssv3669619, nssv3669622, nssv3669599, nssv3669565, nssv3759933, nssv3759940, nssv3669620, nssv3759949, nssv3669583, nssv3669614, nssv3669516, nssv3669626, nssv3759917, nssv3669624, nssv3669542, nssv3759946, nssv3669531, nssv3669547, nssv3759928, nssv3669568, nssv3669535, nssv3669612, nssv3759937, nssv3669548, nssv3759950, nssv3759952, nssv3669514, nssv3669592, nssv3669618, nssv3759958, nssv3669554, nssv3759943, nssv3759925, nssv3759972, nssv3669629, nssv3669538, nssv3759936, nssv3669602, nssv3669589, nssv3669561, nssv3759929, nssv3759967, nssv3669595, nssv3759960, nssv3669593

Samples

Known Genes

Method

SNP array

Analysis

Affymetrix SNP array copy number analysis

Platform

Affymetrix SNP Array 6.0

Comments

Reference

Coe_et_al_2014

Pubmed ID

Accession Number(s)

Frequency

Sample Size	11257
Observed Gain	0
Observed Loss	177
Observed Complex	0
Frequency	n/a