A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1020579



Internal ID19109798
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:39445501..40228945hg38UCSC Ensembl
Innerchr9:41475094..42373963hg19UCSC Ensembl
Innerchr9:41465094..42363959hg18UCSC Ensembl
Cytoband9p12
Allele length
AssemblyAllele length
hg38783445
hg19898870
hg18898866
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3690200, nssv3690199, nssv3690198, nssv3690197
Samples
Known GenesANKRD20A2, ANKRD20A3, KGFLP2, LOC643648, LOC653501, MGC21881, SPATA31A5, SPATA31A7, ZNF658B
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1020579
Frequency
Sample Size11257
Observed Gain3
Observed Loss1
Observed Complex0
Frequencyn/a


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