A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1017810



Internal ID18760343
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:7172456..8008628hg38UCSC Ensembl
Innerchr8:7029978..7866150hg19UCSC Ensembl
Innerchr8:7017388..7903560hg18UCSC Ensembl
Cytoband8p23.1
Allele length
AssemblyAllele length
hg38836173
hg19836173
hg18886173
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv6895n100
Supporting Variantsnssv3677683, nssv3677685, nssv3677684, nssv3677682, nssv3677681
Samples
Known GenesDEFB103A, DEFB103B, DEFB104A, DEFB104B, DEFB105A, DEFB105B, DEFB106A, DEFB106B, DEFB107A, DEFB107B, DEFB109P1B, DEFB4A, DEFB4B, FAM66B, FAM66E, FAM90A10P, FAM90A7P, LINC00965, PRR23D1, PRR23D2, SPAG11A, SPAG11B, USP17L1P, USP17L3, USP17L4, USP17L8, ZNF705B, ZNF705G
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1017810
Frequency
Sample Size29084
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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