A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1016015



Internal ID19105233
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32481746..32559495hg38UCSC Ensembl
Innerchr6:32449523..32527272hg19UCSC Ensembl
Innerchr6:32557501..32635250hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3877750
hg1977750
hg1877750
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv5949n100
Supporting Variantsnssv3745391, nssv3656026, nssv3745402, nssv3745397, nssv3745393, nssv3745384, nssv3656033, nssv3656023, nssv3745405, nssv3656024, nssv3745398, nssv3745395, nssv3745389, nssv3745386, nssv3656001, nssv3656017, nssv3656014, nssv3656027, nssv3656031, nssv3656010, nssv3656007, nssv3745401, nssv3745390, nssv3656009, nssv3656003, nssv3656012, nssv3656029, nssv3655999, nssv3656015, nssv3656019, nssv3745387, nssv3656006, nssv3656018, nssv3656008, nssv3656021, nssv3745394, nssv3656000, nssv3656034, nssv3745392, nssv3656005, nssv3745385, nssv3745400, nssv3656032, nssv3656028, nssv3656030, nssv3745388, nssv3656013, nssv3656002, nssv3655998, nssv3656004, nssv3656016, nssv3656025, nssv3745399, nssv3656020, nssv3745396, nssv3745403, nssv3745404, nssv3656011, nssv3656022
Samples
Known GenesHLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1016015
Frequency
Sample Size11257
Observed Gain58
Observed Loss1
Observed Complex0
Frequencyn/a


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