A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10108



Internal ID15498385
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:105771626..105775505hg38UCSC Ensembl
Outerchr2:106388083..106391962hg19UCSC Ensembl
Outerchr2:105754515..105758394hg18UCSC Ensembl
Outerchr2:105846601..105850480hg17UCSC Ensembl
Cytoband2q12.2
Allele length
AssemblyAllele length
hg383880
hg193880
hg183880
hg173880
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv27919
SamplesNA11830
Known GenesNCK2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10108
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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