A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv1009034

Internal ID

18751565

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr1:25269444..25336807	hg38	UCSC Ensembl
Inner	chr1:25595935..25663298	hg19	UCSC Ensembl
Inner	chr1:25468522..25535885	hg18	UCSC Ensembl

Cytoband

1p36.11

Allele length

Assembly	Allele length
hg38	67364
hg19	67364
hg18	67364

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv3700325, nssv3475671, nssv3698559, nssv3700321, nssv3470250, nssv3464453, nssv3698563, nssv3477503, nssv3700324, nssv3698607, nssv3469276, nssv3481149, nssv3467459, nssv3698584, nssv3478520, nssv3473286, nssv3477376, nssv3698543, nssv3481933, nssv3474448, nssv3698589, nssv3476876, nssv3474897, nssv3700304, nssv3467428, nssv3698604, nssv3465383, nssv3698593, nssv3472425, nssv3468182, nssv3698547, nssv3472198, nssv3698600, nssv3480469, nssv3473867, nssv3700307, nssv3468471, nssv3477006, nssv3473240, nssv3698601, nssv3698553, nssv3475810, nssv3468142, nssv3700318, nssv3476677, nssv3698602, nssv3698561, nssv3700313, nssv3469287, nssv3482560, nssv3479340, nssv3474760, nssv3698549, nssv3469335, nssv3698551, nssv3477869, nssv3700301, nssv3698575, nssv3479854, nssv3465670, nssv3480796, nssv3475728, nssv3466453, nssv3467268, nssv3698566, nssv3700317, nssv3476041, nssv3698588, nssv3469122, nssv3700305, nssv3698542, nssv3468490, nssv3475663, nssv3469053, nssv3474300, nssv3469941, nssv3700311, nssv3480774, nssv3698548, nssv3700303, nssv3463271, nssv3700314, nssv3698554, nssv3700320, nssv3482065, nssv3478655, nssv3698570, nssv3465573, nssv3698560, nssv3466988, nssv3700323, nssv3480315, nssv3470668, nssv3474454, nssv3474037, nssv3466077, nssv3698599, nssv3466027, nssv3465948, nssv3698546, nssv3475269, nssv3698608, nssv3466955, nssv3698574, nssv3477811, nssv3471229, nssv3481175, nssv3478406, nssv3698595, nssv3698592, nssv3477073, nssv3472140, nssv3698578, nssv3469610, nssv3466800, nssv3463525, nssv3698585, nssv3470716, nssv3475889, nssv3471799, nssv3698577, nssv3700306, nssv3479432, nssv3477264, nssv3464139, nssv3475846, nssv3698611, nssv3700316, nssv3463099, nssv3471282, nssv3480062, nssv3475359, nssv3698555, nssv3700319, nssv3698590, nssv3465629, nssv3698603, nssv3700322, nssv3472864, nssv3472202, nssv3698586, nssv3480342, nssv3468693, nssv3698606, nssv3465829, nssv3698550, nssv3471737, nssv3698598, nssv3698594, nssv3698569, nssv3470220, nssv3698572, nssv3698597, nssv3464059, nssv3473014, nssv3470083, nssv3469387, nssv3698552, nssv3468300, nssv3467584, nssv3700312, nssv3698564, nssv3469427, nssv3698591, nssv3464381, nssv3698605, nssv3698557, nssv3478825, nssv3466870, nssv3698609, nssv3698587, nssv3479910, nssv3476999, nssv3698610, nssv3479926, nssv3480571, nssv3470148, nssv3475632, nssv3698567, nssv3478480, nssv3471281, nssv3482178, nssv3467330, nssv3698576, nssv3466765, nssv3467662, nssv3698568, nssv3698556, nssv3463140, nssv3480696, nssv3698545, nssv3479003, nssv3480748, nssv3481000, nssv3698571, nssv3698612, nssv3482646, nssv3473394, nssv3464743, nssv3700308, nssv3482726, nssv3463470, nssv3698580, nssv3700310, nssv3698573, nssv3463347, nssv3700302, nssv3466603, nssv3700315, nssv3482592, nssv3698582, nssv3463934, nssv3698583, nssv3698565, nssv3482164, nssv3470111, nssv3698562, nssv3698558, nssv3466148, nssv3480256, nssv3478699, nssv3700309, nssv3698544, nssv3479968, nssv3698596, nssv3468589, nssv3464146, nssv3462934, nssv3698579, nssv3698581

Samples

Known Genes

Method

SNP array

Analysis

Affymetrix SNP array copy number analysis

Platform

Affymetrix SNP Array 6.0

Comments

Reference

Coe_et_al_2014

Pubmed ID

Accession Number(s)

Frequency

Sample Size	29084
Observed Gain	151
Observed Loss	79
Observed Complex	0
Frequency	n/a