A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1006828



Internal ID18749359
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:16850538..16949734hg38UCSC Ensembl
Innerchr1:17177033..17276229hg19UCSC Ensembl
Innerchr1:17049620..17148816hg18UCSC Ensembl
Cytoband1p36.13
Allele length
AssemblyAllele length
hg3899197
hg1999197
hg1899197
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3479165, nssv3465003, nssv3464272, nssv3463758, nssv3474179, nssv3462769, nssv3700137, nssv3477926, nssv3700136, nssv3471245, nssv3477410, nssv3467984, nssv3471291, nssv3477465, nssv3480631, nssv3470456, nssv3476691, nssv3700135, nssv3467228, nssv3474178, nssv3700138, nssv3482066, nssv3464892, nssv3464446
Samples
Known GenesCROCC, MIR3675
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1006828
Frequency
Sample Size29084
Observed Gain23
Observed Loss1
Observed Complex0
Frequencyn/a


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