A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1002889



Internal ID18745421
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:198619566..198684964hg38UCSC Ensembl
Innerchr1:198588696..198654093hg19UCSC Ensembl
Innerchr1:196855319..196920716hg18UCSC Ensembl
Cytoband1q31.3
Allele length
AssemblyAllele length
hg3865399
hg1965398
hg1865398
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3705491
Samples
Known GenesPTPRC
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1002889
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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