A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv1002240

Internal ID

19091457

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr3:65202778..65224765	hg38	UCSC Ensembl
Inner	chr3:65188453..65210440	hg19	UCSC Ensembl
Inner	chr3:65163493..65185480	hg18	UCSC Ensembl

Cytoband

3p14.1

Allele length

Assembly	Allele length
hg38	21988
hg19	21988
hg18	21988

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv3594830, nssv3731187, nssv3594807, nssv3594818, nssv3731203, nssv3594753, nssv3732716, nssv3594815, nssv3594809, nssv3731180, nssv3594835, nssv3594790, nssv3731217, nssv3732726, nssv3731229, nssv3594808, nssv3732727, nssv3594754, nssv3731199, nssv3731194, nssv3594849, nssv3732739, nssv3732741, nssv3732738, nssv3594780, nssv3732736, nssv3732710, nssv3594792, nssv3594778, nssv3731197, nssv3594756, nssv3732737, nssv3732724, nssv3594839, nssv3594826, nssv3594820, nssv3732744, nssv3594828, nssv3594761, nssv3594829, nssv3731225, nssv3594785, nssv3732713, nssv3731221, nssv3732731, nssv3594833, nssv3731219, nssv3594842, nssv3732722, nssv3731189, nssv3731184, nssv3732728, nssv3594797, nssv3594793, nssv3594768, nssv3594781, nssv3731202, nssv3594813, nssv3731185, nssv3594769, nssv3731182, nssv3594766, nssv3732717, nssv3731210, nssv3731186, nssv3594773, nssv3731193, nssv3594831, nssv3594806, nssv3594800, nssv3594764, nssv3731214, nssv3594758, nssv3731207, nssv3594832, nssv3594846, nssv3731204, nssv3731209, nssv3732720, nssv3731211, nssv3594840, nssv3731208, nssv3732740, nssv3594838, nssv3731215, nssv3731188, nssv3594788, nssv3732742, nssv3594817, nssv3732714, nssv3732723, nssv3594795, nssv3594782, nssv3594775, nssv3594774, nssv3594825, nssv3594802, nssv3731181, nssv3731196, nssv3594804, nssv3594759, nssv3594787, nssv3594848, nssv3594783, nssv3732733, nssv3594760, nssv3594834, nssv3594822, nssv3594814, nssv3594801, nssv3731216, nssv3731190, nssv3594845, nssv3594771, nssv3731192, nssv3594823, nssv3594763, nssv3732732, nssv3731222, nssv3732735, nssv3731230, nssv3594803, nssv3731220, nssv3594791, nssv3594770, nssv3732730, nssv3594821, nssv3594799, nssv3731198, nssv3594805, nssv3731228, nssv3731213, nssv3731200, nssv3731227, nssv3594798, nssv3594776, nssv3594836, nssv3594827, nssv3594816, nssv3594843, nssv3594757, nssv3594811, nssv3732721, nssv3731223, nssv3731231, nssv3594844, nssv3731206, nssv3731183, nssv3594786, nssv3594810, nssv3594755, nssv3594752, nssv3594762, nssv3732743, nssv3732711, nssv3732715, nssv3594777, nssv3594767, nssv3594796, nssv3732719, nssv3731205, nssv3594824, nssv3731201, nssv3731232, nssv3731212, nssv3594751, nssv3594847, nssv3594837, nssv3732725, nssv3594765, nssv3731226, nssv3731218, nssv3594819, nssv3594772, nssv3732709, nssv3594841, nssv3594784, nssv3732729, nssv3732712, nssv3731195, nssv3731191, nssv3594812, nssv3594789, nssv3732718, nssv3732734, nssv3594779, nssv3594794, nssv3731224

Samples

Known Genes

Method

SNP array

Analysis

Affymetrix SNP array copy number analysis

Platform

Affymetrix SNP Array 6.0

Comments

Reference

Coe_et_al_2014

Pubmed ID

Accession Number(s)

Frequency

Sample Size	11257
Observed Gain	0
Observed Loss	188
Observed Complex	0
Frequency	n/a