A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10012



Internal ID15844975
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrY:6243014..6269355hg38UCSC Ensembl
OuterchrY:6111055..6137396hg19UCSC Ensembl
OuterchrY:6171055..6197396hg18UCSC Ensembl
OuterchrY:6154416..6180757hg17UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg3826342
hg1926342
hg1826342
hg1726342
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv27792, nssv26013, nssv27799
SamplesNA18504, NA07048
Known GenesTSPY2, TTTY23, TTTY23B
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10012
Frequency
Sample Size31
Observed Gain1
Observed Loss1
Observed Complex0
Frequencyn/a


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