A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1001189



Internal ID19090406
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:188767276..188815021hg38UCSC Ensembl
Innerchr3:188485064..188532809hg19UCSC Ensembl
Innerchr3:189967758..190015503hg18UCSC Ensembl
Cytoband3q28
Allele length
AssemblyAllele length
hg3847746
hg1947746
hg1847746
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv5006n100
Supporting Variantsnssv3611323, nssv3611324, nssv3615042
Samples
Known GenesLPP
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1001189
Frequency
Sample Size11257
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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