A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv9805



Internal ID15193179
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:107698904..116592228hg38UCSC Ensembl
Outerchr10:109458662..118351740hg19UCSC Ensembl
Outerchr10:109448652..118341730hg18UCSC Ensembl
Outerchr10:109448652..118341730hg17UCSC Ensembl
Cytoband10q25.1
Allele length
AssemblyAllele length
hg388893325
hg198893079
hg188893079
hg178893079
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7211
Supporting Variants
SamplesNA18507
Known GenesABLIM1, ACSL5, ADD3, ADD3-AS1, ADRA2A, ADRB1, AFAP1L2, ATRNL1, BBIP1, C10orf118, CASP7, CCDC172, DCLRE1A, DUSP5, FAM160B1, GFRA1, GPAM, GUCY2GP, HABP2, MIR2110, MIR4295, MIR4483, MIR4680, MIR6715A, MIR6715B, MXI1, NHLRC2, NRAP, PDCD4, PDCD4-AS1, PLEKHS1, PNLIP, PNLIPRP1, PNLIPRP3, RBM20, RNU6-53P, RPL13AP6, SHOC2, SMC3, SMNDC1, TCF7L2, TDRD1, TECTB, TRUB1, VTI1A, VWA2, XPNPEP1, ZDHHC6
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv9805
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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