A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv9788



Internal ID15193158
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrY:6256129..9936872hg38UCSC Ensembl
OuterchrY:6124170..9774481hg19UCSC Ensembl
OuterchrY:6184170..10384481hg18UCSC Ensembl
OuterchrY:6167531..10367842hg17UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg383680744
hg193650312
hg184200312
hg174200312
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7473
Supporting Variants
SamplesNA18507
Known GenesAMELY, FAM197Y2, FAM197Y5, PRKY, RBMY1A3P, RBMY3AP, TBL1Y, TSPY1, TSPY10, TSPY3, TSPY4, TSPY8, TTTY1, TTTY11, TTTY12, TTTY16, TTTY18, TTTY19, TTTY1B, TTTY2, TTTY20, TTTY21, TTTY21B, TTTY22, TTTY23, TTTY23B, TTTY2B, TTTY7, TTTY7B, TTTY8, TTTY8B
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv9788
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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