A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv976



Internal ID15198258
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:133388509..133573114hg38UCSC Ensembl
Outerchr10:135202013..135386618hg19UCSC Ensembl
Outerchr10:135052003..135236608hg18UCSC Ensembl
Outerchr10:135090894..135275499hg17UCSC Ensembl
Cytoband10q26.3
Allele length
AssemblyAllele length
hg38184606
hg19184606
hg18184606
hg17184606
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv7631
Supporting Variants
SamplesNA19240
Known GenesCYP2E1, MTG1, PAOX, SCART1, SPRN, SPRNP1, SYCE1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv976
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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