A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv9632



Internal ID15193485
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:169134647..178289115hg38UCSC Ensembl
Outerchr3:168852435..178006903hg19UCSC Ensembl
Outerchr3:170335129..179489597hg18UCSC Ensembl
Outerchr3:170335137..179489605hg17UCSC Ensembl
Cytoband3q26.2
Allele length
AssemblyAllele length
hg389154469
hg199154469
hg189154469
hg179154469
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7356
Supporting Variants
SamplesNA18507
Known GenesACTRT3, CLDN11, ECT2, EIF5A2, FNDC3B, GHSR, GPR160, LINC00501, LINC00578, LOC100128164, LRRC31, LRRC34, LRRIQ4, MECOM, MIR4789, MIR548AY, MIR569, MIR6828, MYNN, NAALADL2, NAALADL2-AS3, NCEH1, NLGN1, PHC3, PLD1, PRKCI, RPL22L1, SAMD7, SEC62, SKIL, SLC2A2, SLC7A14, SPATA16, TBL1XR1, TERC, TMEM212, TNFSF10, TNIK
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv9632
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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