A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv9613



Internal ID15193015
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:38952080..38995529hg38UCSC Ensembl
Outerchr22:39348085..39391534hg19UCSC Ensembl
Outerchr22:37678031..37721480hg18UCSC Ensembl
Outerchr22:37672585..37716034hg17UCSC Ensembl
Cytoband22q13.1
Allele length
AssemblyAllele length
hg3843450
hg1943450
hg1843450
hg1743450
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3627
Supporting Variants
SamplesNA18507
Known GenesAPOBEC3A, APOBEC3A_B, APOBEC3B, APOBEC3B-AS1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv9613
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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