A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv9494



Internal ID15539820
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:57138668..57178527hg38UCSC Ensembl
Outerchr13:57712802..57752661hg19UCSC Ensembl
Outerchr13:56610803..56650662hg18UCSC Ensembl
Outerchr13:56610803..56650662hg17UCSC Ensembl
Cytoband13q21.1
Allele length
AssemblyAllele length
hg3839860
hg1939860
hg1839860
hg1739860
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv1058
Supporting Variants
SamplesNA18507
Known GenesPRR20A, PRR20B, PRR20C, PRR20D, PRR20E
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv9494
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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