A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv936



Internal ID15198351
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:154154060..154210197hg38UCSC Ensembl
OuterchrX:153419533..153475667hg19UCSC Ensembl
OuterchrX:153072727..153128861hg18UCSC Ensembl
OuterchrX:152940380..152996514hg17UCSC Ensembl
CytobandXq28
Allele length
AssemblyAllele length
hg3856138
hg1956135
hg1856135
hg1756135
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7161
Supporting Variants
SamplesNA19240
Known GenesOPN1LW, OPN1MW, OPN1MW2
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv936
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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