A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv925616



Internal ID15872886
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:176086198..176144186hg38UCSC Ensembl
Innerchr2:176950926..177008914hg19UCSC Ensembl
Innerchr2:176659172..176717160hg18UCSC Ensembl
Cytoband2q31.1
Allele length
AssemblyAllele length
hg3857989
hg1957989
hg1857989
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv583673
Supporting Variants
Samples
Known GenesHOXD10, HOXD11, HOXD12, HOXD13, HOXD8, HOXD9, HOXD-AS2
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv925616
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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