A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv873116



Internal ID15820386
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:48543040..48627174hg38UCSC Ensembl
Innerchr17:46620402..46704536hg19UCSC Ensembl
Innerchr17:43975401..44059535hg18UCSC Ensembl
Cytoband17q21.32
Allele length
AssemblyAllele length
hg3884135
hg1984135
hg1884135
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv575482
Supporting Variants
Samples
Known GenesHOXB2, HOXB3, HOXB4, HOXB5, HOXB6, HOXB7, HOXB8, HOXB9, HOXB-AS1, HOXB-AS3, MIR10A
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv873116
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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