A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv873



Internal ID15198354
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:52679814..52819561hg38UCSC Ensembl
OuterchrX:52708864..52848585hg19UCSC Ensembl
OuterchrX:52725589..52865310hg18UCSC Ensembl
OuterchrX:52591885..52731606hg17UCSC Ensembl
CytobandXp11.22
Allele length
AssemblyAllele length
hg38139748
hg19139722
hg18139722
hg17139722
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7446
Supporting Variants
SamplesNA19240
Known GenesSPANXN5, SSX2, SSX2B, XAGE5
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv873
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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