A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv863



Internal ID15544967
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:47968293..48133914hg38UCSC Ensembl
OuterchrX:47827692..47993296hg19UCSC Ensembl
OuterchrX:47712636..47878240hg18UCSC Ensembl
OuterchrX:47583946..47749550hg17UCSC Ensembl
CytobandXp11.23
Allele length
AssemblyAllele length
hg38165622
hg19165605
hg18165605
hg17165605
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv6890
Supporting Variants
SamplesNA19240
Known GenesSPACA5, SPACA5B, SSX6, ZNF182, ZNF630
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv863
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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