A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv8350



Internal ID15188828
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:27112943..27157722hg38UCSC Ensembl
Outerchr7:27152562..27197341hg19UCSC Ensembl
Outerchr7:27119087..27163866hg18UCSC Ensembl
Outerchr7:26925802..26970581hg17UCSC Ensembl
Cytoband7p15.2
Allele length
AssemblyAllele length
hg3844780
hg1944780
hg1844780
hg1744780
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv5674
Supporting Variants
SamplesNA12156
Known GenesHOXA3, HOXA4, HOXA5, HOXA6, HOXA7, HOXA-AS3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv8350
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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