A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv7890



Internal ID15535974
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:159896535..159929774hg38UCSC Ensembl
Outerchr3:159614324..159647563hg19UCSC Ensembl
Outerchr3:161097018..161130257hg18UCSC Ensembl
Outerchr3:161097026..161130265hg17UCSC Ensembl
Cytoband3q25.33
Allele length
AssemblyAllele length
hg386196
hg196196
hg186196
hg176196
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4087
Supporting Variants
SamplesNA12156
Known GenesIL12A-AS1, IQCJ-SCHIP1, SCHIP1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv7890
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer