A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv7818



Internal ID15536046
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:64179135..64224047hg38UCSC Ensembl
Outerchr3:64164811..64209723hg19UCSC Ensembl
Outerchr3:64139851..64184763hg18UCSC Ensembl
Outerchr3:64139851..64184763hg17UCSC Ensembl
Cytoband3p14.1
Allele length
AssemblyAllele length
hg3844913
hg1944913
hg1844913
hg1744913
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3851
Supporting Variants
SamplesNA12156
Known GenesPRICKLE2, PRICKLE2-AS3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv7818
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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