A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv7802



Internal ID15536062
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:47160040..47204948hg38UCSC Ensembl
Outerchr3:47201530..47246438hg19UCSC Ensembl
Outerchr3:47176534..47221442hg18UCSC Ensembl
Outerchr3:47176534..47221442hg17UCSC Ensembl
Cytoband3p21.31
Allele length
AssemblyAllele length
hg3844909
hg1944909
hg1844909
hg1744909
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3801
Supporting Variants
SamplesNA12156
Known GenesKIF9-AS1, SETD2
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv7802
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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