A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv7149



Internal ID15190029
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:180777664..180796575hg38UCSC Ensembl
Outerchr1:180746800..180765711hg19UCSC Ensembl
Outerchr1:179013423..179032334hg18UCSC Ensembl
Outerchr1:177478457..177497368hg17UCSC Ensembl
Cytoband1q25.3
Allele length
AssemblyAllele length
hg3818912
hg1918912
hg1818912
hg1718912
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv3777
Supporting Variants
SamplesNA12156
Known GenesXPR1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv7149
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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