A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv7036



Internal ID15190142
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:149805578..149848542hg38UCSC Ensembl
Outerchr1:149777134..149820109hg19UCSC Ensembl
Outerchr1:148043758..148086733hg18UCSC Ensembl
Outerchr1:146590207..146633182hg17UCSC Ensembl
Cytoband1q21.2
Allele length
AssemblyAllele length
hg3842965
hg1942976
hg1842976
hg1742976
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7182
Supporting Variants
SamplesNA12156
Known GenesHIST2H2AA3, HIST2H2AA4, HIST2H2BF, HIST2H3A, HIST2H3C, HIST2H3D, HIST2H4A, HIST2H4B
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv7036
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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