A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv702443



Internal ID15092409
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:64870569..65489858hg38UCSC Ensembl
Innerchr11:64638041..65257329hg19UCSC Ensembl
Innerchr11:64394617..65013905hg18UCSC Ensembl
Innerchr11:64394617..65013905hg17UCSC Ensembl
Cytoband11q13.1
Allele length
AssemblyAllele length
hg38619290
hg19619289
hg18619289
hg17619289
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv526181
Supporting Variants
Samples
Known GenesARL2, ARL2-SNX15, ATG2A, BATF2, C11orf85, CAPN1, CDC42EP2, CDCA5, DPF2, EHD1, FAU, FRMD8, GPHA2, MIR192, MIR194-2, MIR612, MIR6749, MIR6750, MIR6751, MIR6879, MRPL49, NAALADL1, NEAT1, POLA2, PPP2R5B, SAC3D1, SLC22A20, SLC25A45, SNX15, SPDYC, SYVN1, TIGD3, TM7SF2, TMEM262, VPS51, ZFPL1, ZNHIT2
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nssv702443
Frequency
Sample Size2026
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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