A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv700274



Internal ID15090240
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:67136529..68071571hg38UCSC Ensembl
Innerchr16:67170432..68105474hg19UCSC Ensembl
Innerchr16:65727933..66662975hg18UCSC Ensembl
Innerchr16:65727933..66662975hg17UCSC Ensembl
Cytoband16q22.1
Allele length
AssemblyAllele length
hg38935043
hg19935043
hg18935043
hg17935043
Variant TypeCNV loss
Copy Number
Allele StateHeterozygous
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv524363
Supporting Variants
Samples
Known GenesACD, AGRP, ATP6V0D1, B3GNT9, C16orf70, C16orf86, CENPT, CTCF, CTRL, DDX28, DPEP2, DPEP3, DUS2, E2F4, EDC4, ELMO3, ENKD1, EXOC3L1, FAM65A, FBXL8, FHOD1, GFOD2, HSD11B2, HSF4, KCTD19, KIAA0895L, LCAT, LOC100131303, LOC100505942, LRRC29, LRRC36, MIR328, NOL3, NRN1L, NUTF2, PARD6A, PLEKHG4, PSKH1, PSMB10, RANBP10, RLTPR, SLC12A4, SLC9A5, THAP11, TMEM208, TPPP3, TRADD, TSNAXIP1, ZDHHC1
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nssv700274
Frequency
Sample Size2026
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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