A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv699909



Internal ID15089875
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:16005414..16226277hg38UCSC Ensembl
Innerchr1:16331909..16552772hg19UCSC Ensembl
Innerchr1:16204496..16425359hg18UCSC Ensembl
Innerchr1:16077215..16298078hg17UCSC Ensembl
Cytoband1p36.13
Allele length
AssemblyAllele length
hg38220864
hg19220864
hg18220864
hg17220864
Variant TypeCNV loss
Copy Number
Allele StateHeterozygous
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv524045
Supporting Variants
Samples
Known GenesARHGEF19, C1orf64, CLCNKA, CLCNKB, EPHA2, FAM131C, HSPB7
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nssv699909
Frequency
Sample Size2026
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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