A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv698538



Internal ID15435190
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:102260929..102447226hg38UCSC Ensembl
Innerchr5:101596633..101782930hg19UCSC Ensembl
Innerchr5:101624532..101810829hg18UCSC Ensembl
Innerchr5:101624532..101810829hg17UCSC Ensembl
Cytoband5q21.1
Allele length
AssemblyAllele length
hg38186298
hg19186298
hg18186298
hg17186298
Variant TypeCNV loss
Copy Number
Allele StateHeterozygous
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv522882
Supporting Variants
Samples
Known GenesSLCO4C1, SLCO6A1
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nssv698538
Frequency
Sample Size2026
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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