A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv687082



Internal ID15423734
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46148326..47703613hg19UCSC Ensembl
Innerchr10:45468332..47173619hg18UCSC Ensembl
Innerchr10:45468332..47173619hg17UCSC Ensembl
Cytoband10q11.21
Allele length
AssemblyAllele length
hg191555288
hg181705288
hg171705288
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv516485
Supporting Variants
Samples
Known GenesAGAP4, AGAP9, ANTXRL, ANTXRLP1, ANXA8, BMS1P1, BMS1P2, BMS1P5, BMS1P6, FAM21C, FAM25C, FAM25G, FAM35BP, FAM35DP, FRMPD2P1, GLUD1P7, GPRIN2, HNRNPA1P33, LINC00842, LOC100996758, NPY4R, PTPN20A, PTPN20B, SYT15, ZFAND4
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nssv687082
Frequency
Sample Size2026
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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