A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv679916



Internal ID15069882
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:159953169..159965779hg38UCSC Ensembl
Innerchr1:159922959..159935569hg19UCSC Ensembl
Innerchr1:158189583..158202193hg18UCSC Ensembl
Innerchr1:156736032..156748642hg17UCSC Ensembl
Cytoband1q23.2
Allele length
AssemblyAllele length
hg3812611
hg1912611
hg1812611
hg1712611
Variant TypeCNV loss
Copy Number
Allele StateHeterozygous
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv520773
Supporting Variants
Samples
Known GenesLINC01133, SLAMF9
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nssv679916
Frequency
Sample Size2026
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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