A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv6792



Internal ID15537071
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:47875396..47920984hg38UCSC Ensembl
Outerchr19:48378653..48424241hg19UCSC Ensembl
Outerchr19:53070465..53116053hg18UCSC Ensembl
Outerchr19:53070465..53116053hg17UCSC Ensembl
Cytoband19q13.32
Allele length
AssemblyAllele length
hg3845589
hg1945589
hg1845589
hg1745589
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv2513
Supporting Variants
SamplesNA12156
Known GenesSNAR-A1, SNAR-A12, SNAR-A13, SNAR-A2, SNAR-C1, SNAR-C2, SNAR-C5, SULT2A1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv6792
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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