A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv677657



Internal ID15067623
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:55360823..55385341hg38UCSC Ensembl
Innerchr19:55872191..55896709hg19UCSC Ensembl
Innerchr19:60564003..60588521hg18UCSC Ensembl
Innerchr19:60564003..60588521hg17UCSC Ensembl
Cytoband19q13.42
Allele length
AssemblyAllele length
hg3824519
hg1924519
hg1824519
hg1724519
Variant TypeCNV loss
Copy Number
Allele StateHeterozygous
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv516199
Supporting Variants
Samples
Known GenesFAM71E2, IL11, TMEM190, TMEM238
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nssv677657
Frequency
Sample Size2026
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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