A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv6662



Internal ID15190516
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:21555200..22688636hg38UCSC Ensembl
Outerchr16:21566521..22699957hg19UCSC Ensembl
Outerchr16:21474022..22607458hg18UCSC Ensembl
Outerchr16:21474022..22607458hg17UCSC Ensembl
Cytoband16p12.1
Allele length
AssemblyAllele length
hg381133437
hg191133437
hg181133437
hg171133437
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7280
Supporting Variants
SamplesNA12156
Known GenesC16orf52, CDR2, EEF2K, IGSF6, LOC100190986, LOC653786, METTL9, NPIPB5, OTOA, PDZD9, POLR3E, RRN3P1, RRN3P3, SMG1P1, UQCRC2, VWA3A
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv6662
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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