A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv6635



Internal ID15190543
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:57294526..61405229hg38UCSC Ensembl
Outerchr15:57586724..61697428hg19UCSC Ensembl
Outerchr15:55374016..59484720hg18UCSC Ensembl
Outerchr15:55374016..59484720hg17UCSC Ensembl
Cytoband15q21.3
Allele length
AssemblyAllele length
hg384110704
hg194110705
hg184110705
hg174110705
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7266
Supporting Variants
SamplesNA12156
Known GenesADAM10, ALDH1A2, ANXA2, AQP9, BNIP2, CCNB2, CGNL1, FAM63B, FAM81A, FOXB1, GCNT3, GCOM1, GTF2A2, HSP90AB4P, LDHAL6B, LINC00926, LIPC, MIR2116, MYO1E, MYZAP, NARG2, POLR2M, RNF111, RORA, SLTM
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv6635
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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