A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv660863



Internal ID15397515
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46169848..48312291hg19UCSC Ensembl
Innerchr10:45489854..47932297hg18UCSC Ensembl
Innerchr10:45489854..47932297hg17UCSC Ensembl
Cytoband10q11.21
Allele length
AssemblyAllele length
hg192142444
hg182442444
hg172442444
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv516485
Supporting Variants
Samples
Known GenesAGAP4, AGAP9, ANTXRL, ANTXRLP1, ANXA8, ANXA8L1, ANXA8L2, BMS1P1, BMS1P2, BMS1P5, BMS1P6, CTSLP2, FAM21B, FAM21C, FAM25B, FAM25C, FAM25G, FAM35BP, FAM35DP, FRMPD2P1, GLUD1P7, GPRIN2, HNRNPA1P33, LINC00842, LOC100996758, NPY4R, PTPN20A, PTPN20B, SYT15
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nssv660863
Frequency
Sample Size2026
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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