A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv654543



Internal ID15044509
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:194456593..194492803hg38UCSC Ensembl
Innerchr3:194177322..194213532hg19UCSC Ensembl
Innerchr3:195658611..195694821hg18UCSC Ensembl
Innerchr3:195658619..195694829hg17UCSC Ensembl
Cytoband3q29
Allele length
AssemblyAllele length
hg3836211
hg1936211
hg1836211
hg1736211
Variant TypeCNV loss
Copy Number
Allele StateHeterozygous
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv516867
Supporting Variants
Samples
Known GenesATP13A3, LINC00884
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nssv654543
Frequency
Sample Size2026
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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