A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv6472



Internal ID15537392
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:89869469..90013100hg38UCSC Ensembl
Outerchr11:89602637..89746268hg19UCSC Ensembl
Outerchr11:89242285..89385916hg18UCSC Ensembl
Outerchr11:89242285..89385916hg17UCSC Ensembl
Cytoband11q14.3
Allele length
AssemblyAllele length
hg38143632
hg19143632
hg18143632
hg17143632
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7222
Supporting Variants
SamplesNA12156
Known GenesMIR5692A1, TRIM49D1, TRIM49D2P, TRIM53AP, TRIM64, TRIM64B
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv6472
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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