A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv6444



Internal ID15190734
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:7436235..9736666hg38UCSC Ensembl
Outerchr11:7457466..9758213hg19UCSC Ensembl
Outerchr11:7414042..9714789hg18UCSC Ensembl
Outerchr11:7414042..9714789hg17UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg382300432
hg192300748
hg182300748
hg172300748
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7215
Supporting Variants
SamplesNA12156
Known GenesAKIP1, ASCL3, C11orf16, CYB5R2, DENND5A, EIF3F, IPO7, KRT8P41, LMO1, LOC100506258, LOC283299, LOC644656, MIR5691, NLRP10, NRIP3, OLFML1, OR10A3, OR10A6, OR5E1P, OR5P2, OR5P3, OVCH2, PPFIBP2, RIC3, RPL27A, SCUBE2, SNORA23, SNORA3, SNORA45, ST5, STK33, SWAP70, SYT9, TMEM41B, TMEM9B, TMEM9B-AS1, TRIM66, TUB, WEE1, ZNF143
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv6444
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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