A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv623998



Internal ID15822571
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:21045427..21051427hg38UCSC Ensembl
Outerchr6:21045658..21051658hg19UCSC Ensembl
Outerchr6:21153637..21159637hg18UCSC Ensembl
Outerchr6:21153637..21159637hg17UCSC Ensembl
Cytoband6p22.3
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv510018
Supporting Variants
SamplesNA18994
Known GenesCDKAL1
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv623998
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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