A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv623881



Internal ID15822454
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:175974288..175980288hg38UCSC Ensembl
Outerchr2:176839016..176845016hg19UCSC Ensembl
Outerchr2:176547262..176553262hg18UCSC Ensembl
Outerchr2:176664523..176670523hg17UCSC Ensembl
Cytoband2q31.1
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv508120
Supporting Variants
SamplesNA18994
Known GenesKIAA1715
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv623881
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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