A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv623820



Internal ID15475707
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:246774411..246839406hg38UCSC Ensembl
Outerchr1:246937713..247002708hg19UCSC Ensembl
Outerchr1:245004336..245069331hg18UCSC Ensembl
Outerchr1:243263754..243328749hg17UCSC Ensembl
Cytoband1q44
Allele length
AssemblyAllele length
hg387216
hg197216
hg187216
hg177216
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv509768
Supporting Variants
SamplesNA18994
Known GenesAHCTF1, LOC149134
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv623820
Frequency
Sample Size4
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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